... diseases that affect the poor in other countries. As an organization funded by US tax dollars, NIH is primarily responsible for advancing the health of Americans. It's not an international charity.
Unfortunately, the poor in America are more affected by 'lifestyle diseases' (smoking and obesity related illnesses, for instance), which may be more difficult to cure as they need to be addressed from a social angle, not just a medical one.
Well according to some graphs I found on Google, malaria mortality rates have reduced significantly in the past few decades [1], as have AIDS death rates [2]. Diabetes rates and mortality have however been continuously increasing.