Tracking people is like 90% of what every organization does. It's why we have names, phone numbers, addresses, id numbers, license plates, etc. "Tracking people = bad" is an untenable assumption.
Perhaps I'm not being clear. "Tracking people involuntarily" might be bad. "Tracking people unnecessarily" might be bad. But they will be bad because they are involuntary and unnecessary, not because they are tracking people.
The overwhelming majority of people are probably ok with recording plates at the border. If it's confined to the border it's not really any different than the customs agent jotting down your license plate. It's also not really "tracking", it's just a record created at that single point. It's the whole network that makes it "tracking"
It's the record keeping everywhere else and tracking that that enables that's not ok.
I honestly support license plate readers on most roads, if they were used for average speed measurements and in conjunction with automated ticketing of people speeding.